Pinned Repositories
bioformats
Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment (particularly UW-Madison LOCI and Glencoe Software). Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
export_fig
A MATLAB toolbox for exporting publication quality figures
ExportSeries
Scratch pad for Java code to write data to one-tiffs.
fiji
A "batteries-included" distribution of ImageJ
FileWriteSPW
Java routines for writing FLIM SPW ome-tiffs.
FileWriteSPWTestHarness
Test routines for FileWriteSPW (which itself creates SPW ome-tiffs)
FLIMfit
FLIMfit-documentation
FLIMreader
imunro's Repositories
imunro/HPC_STORM
Scripts for running ThunderSTORM on IC HPC
imunro/ic-converterM
Scratch space for Matlab routines
imunro/FLIMfit
imunro/thunderstorm
ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging
imunro/Imperial-OMEkit
set of tools to manage data storing etc.
imunro/palm-siever
Visualization and analysis platform for single-molecule localization microscopy
imunro/omero-install
OMERO installation scripts
imunro/bioformats
Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment (particularly UW-Madison LOCI and Glencoe Software). Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
imunro/export_fig
A MATLAB toolbox for exporting publication quality figures
imunro/fiji
A "batteries-included" distribution of ImageJ
imunro/openmicroscopy
OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities, research establishments and industry in Europe and the USA, OME has over 20 active researchers with strong links to the microscopy community. Funded by private and public research grants, OME has been a major force on the international microscopy stage since 2000.
imunro/ome-release
Scripts for OME releases.
imunro/FileWriteSPW
Java routines for writing FLIM SPW ome-tiffs.
imunro/FileWriteSPWTestHarness
Test routines for FileWriteSPW (which itself creates SPW ome-tiffs)
imunro/minimal-omero-client
imunro/omero-superresolution-tables
Example of storing super-resolution data in OMERO
imunro/openFLIM-HCA
imunro/FLIMreader
imunro/FLIMfit-documentation
imunro/ExportSeries
Scratch pad for Java code to write data to one-tiffs.
imunro/ome-documentation
Sphinx-based documentation for the Open Microscopy Environment
imunro/mtools