A stable Docker image with R. The version of most software is hard-coded. This is a minimal configuration suitable for running the Natura 2000 monitoring analysis.
| Available software | Version |
|---|---|
| Ubuntu | 18.04.3 LTS |
| R | 3.6.1 |
| KernSmooth | 2.23-16 |
| MASS | 7.3-51.4 |
| Matrix | 1.2-18 |
| boot | 1.3-23 |
| class | 7.3-15 |
| cluster | 2.1.0 |
| codetools | 0.2-16 |
| foreign | 0.8-72 |
| lattice | 0.20-38 |
| mgcv | 1.8-31 |
| nlme | 3.1-142 |
| nnet | 7.3-12 |
| rpart | 4.1-15 |
| spatial | 7.3-11 |
| survival | 2.44-1.1 |
| BH | 1.69.0-1 |
| DBI | 1.0.0 |
| DT | 0.10 |
| INLA | 19.09.03 |
| MatrixModels | 0.4-1 |
| R6 | 2.4.1 |
| RColorBrewer | 1.1-2 |
| RODBC | 1.3-16 |
| RPostgreSQL | 0.6-2 |
| RSQLite | 2.1.4 |
| Rcpp | 1.0.3 |
| RcppEigen | 0.3.3.7.0 |
| askpass | 1.1 |
| assertthat | 0.2.1 |
| aws.s3 | 0.3.12 |
| aws.signature | 0.5.2 |
| backports | 1.1.5 |
| base64enc | 0.1-3 |
| bit | 1.1-14 |
| bit64 | 0.9-7 |
| blob | 1.2.0 |
| brew | 1.0-6 |
| callr | 3.4.0 |
| cli | 2.0.0 |
| clipr | 0.7.0 |
| clisymbols | 1.2.0 |
| colorspace | 1.4-1 |
| commonmark | 1.7 |
| covr | 3.4.0 |
| crayon | 1.3.4 |
| crosstalk | 1.0.0 |
| curl | 4.3 |
| cyclocomp | 1.1.0 |
| desc | 1.2.0 |
| devtools | 2.2.1 |
| digest | 0.6.23.2 |
| dplyr | 0.8.3 |
| ellipsis | 0.3.0 |
| evaluate | 0.14 |
| fansi | 0.4.0 |
| farver | 2.0.1 |
| fastmap | 1.0.1 |
| fs | 1.3.1 |
| ggplot2 | 3.2.1 |
| gh | 1.0.1 |
| git2r | 0.26.1 |
| git2rdata | 0.2.0 |
| glue | 1.3.1 |
| gtable | 0.3.0 |
| highr | 0.8 |
| hms | 0.5.2 |
| htmltools | 0.4.0 |
| htmlwidgets | 1.5.1 |
| httpuv | 1.5.2 |
| httr | 1.4.1 |
| igraph | 1.2.4.2 |
| ini | 0.3.1 |
| jsonlite | 1.6 |
| labeling | 0.3 |
| later | 1.0.0 |
| lazyeval | 0.2.2 |
| lifecycle | 0.1.0 |
| littler | 0.3.9 |
| lme4 | 1.1-21 |
| lubridate | 1.7.4 |
| magrittr | 1.5 |
| memoise | 1.1.0 |
| mime | 0.7 |
| minqa | 1.2.4 |
| multimput | 0.2.9 |
| munsell | 0.5.0 |
| mvtnorm | 1.0-11 |
| nloptr | 1.2.1 |
| numDeriv | 2016.8-1.1 |
| odbc | 1.2.1 |
| openssl | 1.4.1 |
| optimx | 2018-7.10 |
| pillar | 1.4.2 |
| pkgbuild | 1.0.6 |
| pkgconfig | 2.0.3 |
| pkgload | 1.0.2 |
| plogr | 0.2.0 |
| plyr | 1.8.5 |
| praise | 1.0.0 |
| prettyunits | 1.0.2 |
| processx | 3.4.1 |
| profvis | 0.3.6 |
| promises | 1.1.0 |
| ps | 1.3.0 |
| purrr | 0.3.3 |
| rcmdcheck | 1.3.3 |
| remotes | 2.1.0 |
| reshape2 | 1.4.3 |
| rex | 1.1.2 |
| rlang | 0.4.2 |
| roxygen2 | 7.0.2 |
| rprojroot | 1.3-2 |
| rstudioapi | 0.10 |
| rversions | 2.0.1 |
| scales | 1.1.0 |
| sessioninfo | 1.1.1 |
| shiny | 1.4.0 |
| sourcetools | 0.1.7 |
| sp | 1.3-2 |
| stringdist | 0.9.5.5 |
| stringi | 1.4.3 |
| stringr | 1.4.0 |
| sys | 3.3 |
| testthat | 2.3.1 |
| tibble | 2.1.3 |
| tidyr | 1.0.0 |
| tidyselect | 0.2.5 |
| usethis | 1.5.1 |
| utf8 | 1.1.4 |
| vctrs | 0.2.0 |
| viridisLite | 0.3.0 |
| whisker | 0.4 |
| withr | 2.1.2 |
| xml2 | 1.2.2 |
| xmlparsedata | 1.0.3 |
| xopen | 1.0.0 |
| xtable | 1.8-4 |
| yaml | 2.2.0 |
| zeallot | 0.1.0 |