International Parkinson's Disease Genomics Consortium

Automate-with-Python

“Automate the boring stuff with Python” for Population Genetics, IPDGC Hackathon

Colocalization-Pipeline

iPDGC Hackathon 2021 Project

General-Info

General info regarding the IPDGC, its GitHub site plus current and past projects

GenoML-Brief-Intro

The briefest intro to our genomics focused autoML pipeline

GP2-cohort-tracker

IPDGC x GP2 Hackathon 2021 Project - Cohort Tracker for GP2

iPDGC-PDMR-Portal

iPDGC Parkinson Disease Mendelian Randomization Portal

IPDGC-Trainees

This repo contains the code from the various scripts from the trainee-led projects within IPDGC

Manhattan-Plotter

This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3

Mendelian-Randomization

Sentiment-in-PD-Progression

Web scraping Twitter for sentiment analysis in PD progression, IPDGC Hackathon

ipdgc/Manhattan-Plotter

This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3

ipdgc/IPDGC-Trainees

This repo contains the code from the various scripts from the trainee-led projects within IPDGC

ipdgc/iPDGC-PDMR-Portal

iPDGC Parkinson Disease Mendelian Randomization Portal

ipdgc/Colocalization-Pipeline

iPDGC Hackathon 2021 Project

ipdgc/General-Info

General info regarding the IPDGC, its GitHub site plus current and past projects

ipdgc/GP2-cohort-tracker

IPDGC x GP2 Hackathon 2021 Project - Cohort Tracker for GP2

ipdgc/Sentiment-in-PD-Progression

Web scraping Twitter for sentiment analysis in PD progression, IPDGC Hackathon

ipdgc/Automate-with-Python

“Automate the boring stuff with Python” for Population Genetics, IPDGC Hackathon

ipdgc/GenoML-Brief-Intro

The briefest intro to our genomics focused autoML pipeline

ipdgc/GP2-visualise-longitudinal-variant-effects

IPDGC x GP2 Hackathon 2021 Project - Visualize longitudinal and cross-sectional variant effects

ipdgc/Mendelian-Randomization

ipdgc/Online-PD-Risk-Score

Calculator for PD risk scores, IPDGC Hackathon

ipdgc/PD-Wiki-Loci

Working on PD wiki loci, IPDGC Hackathon

ipdgc/Docker-Coexpression-Networks

Generating coexpression gene network webpages using Docker technology, an IPDGC Hackathon 2019 project

ipdgc/genetic-risk-score

ipdgc/GP2-network-generation

IPDGC x GP2 Hackathon 2021 Project - Network generation and visualization

ipdgc/GP2-pathway-enrichment-pipeline

IPDGC x GP2 Hackathon 2021 Project - Pathway and cell type enrichment pipeline

ipdgc/GP2-post-GWAS-analysis

IPDGC x GP2 Hackathon 2021 Project - post-GWAS analysis

ipdgc/GP2-Variant-Interaction-Pipeline

IPDGC x GP2 Hackathon 2021 Project - Variant Interaction Pipeline

ipdgc/iGraph-Networks

Scripting to run iGraph networks

ipdgc/Pathway-Enrichment-Analysis-Visualization

Visualize the results of pathway enrichment analyses, an IPDGC Hackathon 2019 Project

ipdgc/PD-Project-Tracker

Creating a project tracker for IPDGC, IPDGC Hackathon

ipdgc/pdgsc

PDGSC QC and analysis scripts

ipdgc/pdpmGWAS-browser

PD Progression Meta-GWAS Browser