ProteInfer is an approach for predicting the functional properties of protein sequences using deep neural networks.
To install:
pip3 install -q -r requirements.txt
If running on macOS you will need to remove the tensorflow-gpu line from requirements.txt and GPU-acceleration will not be available.
To run the unit tests:
bash -c 'for f in *_test.py; do python3 $f || exit 1; done'
This repository is still a work in progress. Please check back for more documentation and a manuscript very soon. We are not able to accept pull requests or contributions at this time.