/enhancer-gene-vis

A tool for visualizing ABC enhancer-gene connections in the context of genetic variants.

Primary LanguageTypeScriptApache License 2.0Apache-2.0

ABC Enhancer-Gene Visualization

A tool for visually exploring ABC enhancer-gene connections across biosamples in the context of genetic variants


User Interface

Website: https://flekschas.github.io/enhancer-gene-vis

Paper: Nasser et al., "Genome-wide enhancer maps link risk variants to disease genes", Nature, 2021.

This web-based visualization provides access to genome-wide ABC enhancer-gene connections across 131 biosamples and allows you to correlated the enhancers with genetic variants.

How?

Coming Soon! Meanwhile please read the introduction.

Development

Setting up a development environment

Installation

$ git clone https://github.com/flekschas/enhancer-gene-vis && enhancer-gene-vis
$ npm install

Commands

Developmental server: npm start Production build: npm run build Demo build: npm run build-demo