j-lawson

j-lawson's Stars

• databio/sciquill

  Author academic documents in markdown

  Language:TeX126

• databio/bulker

  Manager for multi-container computing environments

  Language:Jupyter Notebook242

• Christensen-Lab-Dartmouth/MethylNet

  Modular framework for deep learning predictions on methylation data.

  Language:HTML4911

• databio/awesome-atac-analysis

  Links to ATAC-seq analysis tools

  496

• Rdatatable/data.table

  R's data.table package extends data.frame:

  Language:R3.6k974

• gabrielodom/pathwayPCA

  integrative pathway analysis with modern PCA methodology and gene selection

  Language:R112

• genomicsclass/book

  Compiled and pretty version of labs

  193129

• genomicsclass/labs

  Rmd source files for the HarvardX series PH525x

  Language:R2k1.9k

• waldronlab/curatedTCGAData

  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects

  Language:R427

• topepo/caret

  caret (Classification And Regression Training) R package that contains misc functions for training and plotting classification and regression models

  Language:R1.6k636

• databio/GenomicDistributions

  Calculate and plot distributions of genomic ranges

  Language:R2510

• databio/MIRA

  R package for Methylation-based Inference of Regulatory Activity

  Language:R111

• databio/simpleCache

  Simplified R caching for reproducible big data projects

  Language:R346

• databio/COCOA

  Annotating epigenetic variation among samples with region sets in R

  Language:R10

• j-lawson/git-intro-somrc

  A brief introduction to version control via git and GitHub

  21

• nsheff/LOLA

  Locus Overlap Analysis: Enrichment of Genomic Ranges

  Language:R7019