jPleyte

Computational biologist at Oregon Health and Science University

Oregon Health & Science UniversityPortland, OR

Pinned Repositories

BikeAlarm
Attach this to your bike lock, and when cut, an alarm goes off
Language:C++0 2 00
count_domains_in_metagenomic_samples
Reproduce the results documented in the 2020 paper titled Metagenomics of Wastewater Influent from Southern California Wastewater Treatment Facilities in the Era of COVID-19 (https://pubmed.ncbi.nlm.nih.gov/33033132/)
Language:Python0 1 00
genetic-overlap-of-szhizophrenia-and-asd
A network diffusion approach to find genetic overlap to identify the Genetic Overlap of Schizophrenia and ASD.
Language:Java1 2 00
GenomicsDB
Highly performant data storage in C++ for importing, querying and transforming variant data with C/C++/Java/Spark bindings. Used in gatk4.
Language:C++0 1 00
jPleyte.github.io
My Profile
Language:HTML0 1 00
microcontroller-turret
Arduino Motion Sensing Automated Turret
Language:C++2 1 00
mini-projects
Several little projects each with their own project configuration
Language:Java0 2 00
search-spotify-playlists
Search your Spotify playlists for a particular artist or song
Language:Java0 1 00
training-material
A collection of Galaxy-related training material
Language:HTML0 1 00
compbio-galaxy-wrappers
OHSU Galaxy wrappers.
Language:Python6 12 1711

jPleyte/microcontroller-turret
Arduino Motion Sensing Automated Turret
Language:C++2 1 00
jPleyte/genetic-overlap-of-szhizophrenia-and-asd
A network diffusion approach to find genetic overlap to identify the Genetic Overlap of Schizophrenia and ASD.
Language:Java1 2 00
jPleyte/BikeAlarm
Attach this to your bike lock, and when cut, an alarm goes off
Language:C++0 2 00
jPleyte/count_domains_in_metagenomic_samples
Reproduce the results documented in the 2020 paper titled Metagenomics of Wastewater Influent from Southern California Wastewater Treatment Facilities in the Era of COVID-19 (https://pubmed.ncbi.nlm.nih.gov/33033132/)
Language:Python0 1 00
jPleyte/GenomicsDB
Highly performant data storage in C++ for importing, querying and transforming variant data with C/C++/Java/Spark bindings. Used in gatk4.
Language:C++0 1 00
jPleyte/jPleyte.github.io
My Profile
Language:HTML0 1 00
jPleyte/mini-projects
Several little projects each with their own project configuration
Language:Java0 2 00
jPleyte/search-spotify-playlists
Search your Spotify playlists for a particular artist or song
Language:Java0 1 00
jPleyte/training-material
A collection of Galaxy-related training material
Language:HTML0 1 00
jPleyte/usr-local-lib
Utilities, scripts, and examples
Language:Java0 2 00