jackhump/WGS-QC-Pipeline
A Snakemake pipeline for Quality Control of Whole Genome Sequencing data
Python
Issues
- 1
Use KING to test relatedness
#6 opened by jackhump - 0
bugs in collate_stats
#5 opened by jackhump - 1
add RS IDs
#7 opened by jackhump - 0
Take out relatedness filter
#4 opened by jackhump - 0
Sample Missingness
#3 opened by jackhump - 2
add rule to lift over VCFs
#2 opened by jackhump - 2
simplify and refactor
#1 opened by jackhump