clustr
A place to store scripts for automating access to the DIDE cluster.
Works as a wrapper around Rich's great didewin tools!
This is really for internal use and will not be that useful to anyone else.
## login to cluster (didewin config and login)
# packages argument now accepts GitHub package paths and can distinguish between CRAN / GitHub
# Caution: not functional for anything other than CRAN and GitHub packages
clustr::login(username = "dide_username",
remotewd = "directory_on_network_share",
sources = c("source_files.R"),
packages = c("devtools", "github_username/package"),
cluster = "MRC",
log = TRUE)
## mount network share
clustr::mount(username, remotewd)
## open mounted network share
clustr::open_remote(username, remotewd)
## umount network share
clustr::logout(username)
## submit job to cluster
# wrapper around obj$enqueue()
# still in development
clustr::submit(obj, x)