/MOPA

MOPA (Multi Omics Pathway Analysis)

Primary LanguageJupyter Notebook

MOPA : Multi-Omics Pathway Analysis

MOPA (Multi-Omics Pathway Analysis) is a tool for analysis pathway with single wise score with multi-omics. Also analysis pathway with omics unit and gene unit. Providing visualization with pathway score and network and survival analyis.

Tutorial data can be downloaded in https://cobi.knu.ac.kr/tools/mopa/TCGA_COAD.zip

You can track tutorial step by step in tutorial/MOPA_Tutorial.ipynb

Below figure is an workflow method of MOPA

Tutorial using colon cancer data (TCGA-COAD)

visualize 1

visualize 2

visualize 3