Pinned Repositories
acts_as_commentable
The ActiveRecord acts_as_commentable plugin
acts_as_describable
Creates a polymorphic description table easily attachable to any other model.
awstools
csvtools
envv
Envv is a shell-independent way of handling environment variables. (not mine)
file_column
git mirror of file_column plugin, patched to partition ids
jakewendt.github.com
javascrypt
JavaScrypt: Browser-Based Cryptography Tools
my
my settings, .*rc files, etc.
netflix
netflix api demo plugin for rails
jakewendt's Repositories
jakewendt/envv
Envv is a shell-independent way of handling environment variables. (not mine)
jakewendt/notebooks
Jupyter Notebooks
jakewendt/causes.com-levenshtein-challenge
causes.com levenshtein challenge
jakewendt/csvtools
jakewendt/dbq
Command processing database queue
jakewendt/jakewendt.github.com
jakewendt/javascript_game_of_life
Javascript version of John Conway's Game of Life
jakewendt/my
my settings, .*rc files, etc.
jakewendt/period_analysis_perl
jakewendt/poly_property
Meddling with sunspot index made almost entirely of dynamic fields
jakewendt/ruby_integer_verbalize
jakewendt/awstools
jakewendt/active_record_left_joins
jakewendt/active_record_sunspotter
jakewendt/Drop-seq
Java tools for analyzing Drop-seq data
jakewendt/ERVcaller
ERVcaller is a tool designed to accurately detect and genotype non-reference unfixed endogenous retroviruses (ERVs) and other transposable elements (TEs) in the human genome using next-generation sequencing (NGS) data. We evaluated the tools using both simulated and real benchmark whole-genome sequencing (WGS) datasets. ERVcaller is capable to accurately detect various TE insertions of any lengths, particularly ERVs. It allows for the use of a TE reference library regardless of sequence complexity, such as the entire RepBase database. It is easy to install and use with command lines.
jakewendt/flickr_demo
jakewendt/ghostm
GPU-based HOmology Search Tool for Metagenomics
jakewendt/HAWK
Hitting associations with k-mers
jakewendt/html_test
Ruby on Rails plugin for HTML validation and link checking
jakewendt/jakewendt
jakewendt/manta
Structural variant and indel caller for mapped sequencing data
jakewendt/Mutation-Signatures
A collection of perl and R scripts to format COSMIC mutational datasets and extract mutational signature information.
jakewendt/my_core
jakewendt/netflix_demo
jakewendt/netflix_raider
jakewendt/python
jakewendt/ruby_extension
Added functionality for some ruby core classes
jakewendt/test_with_verbosity
jakewendt/tipcc-web
The TIPCC website