Pinned Repositories
BraDiPluS
BraDiPluS (Braille Display Plugs Data Analysis) is an R package to process and analyse data produced using the microfluidic platform for functional drug screening of patient biopsies developed in collaboration with Merten group (EMBL).
git_btm_2018
jakob-wirbel.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
MEFISTO_analyses
Repository containing the code to reproduce the analyses contained in the MEFISTO manuscript
metaG_course_2024_05_22
Material for the "AI Applications in Infection Biology" course happening in May 2024
mlr3extralearners
Extra learners for use in mlr3.
ngless-contrib
A collection of NGLess modules open to community contributions
kinact
Toolbox for Kinase Activity Scoring based on phosphoproteomic data
PHONEMeS
PHONEMeS (PHOsphorylation NEtworks for Mass Spectrometry) is an R package to model signalling networks based on untargeted phosphoproteomics
siamcat
R package for Statistical Inference of Associations between Microbial Communities And host phenoType
jakob-wirbel's Repositories
jakob-wirbel/git_btm_2018
jakob-wirbel/ngless-contrib
A collection of NGLess modules open to community contributions
jakob-wirbel/BraDiPluS
BraDiPluS (Braille Display Plugs Data Analysis) is an R package to process and analyse data produced using the microfluidic platform for functional drug screening of patient biopsies developed in collaboration with Merten group (EMBL).
jakob-wirbel/jakob-wirbel.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
jakob-wirbel/MEFISTO_analyses
Repository containing the code to reproduce the analyses contained in the MEFISTO manuscript
jakob-wirbel/metaG_course_2024_05_22
Material for the "AI Applications in Infection Biology" course happening in May 2024
jakob-wirbel/mlr3extralearners
Extra learners for use in mlr3.
jakob-wirbel/PhaVa
Adapting the phasefinder approach for identifying phase variation to long reads
jakob-wirbel/pypath
python module for signaling pathways analysis accompanying OmniPath
jakob-wirbel/singularity_training
Testing singularity hub integration
jakob-wirbel/ZINQ-v2
Powerful and robust non-parametric association testing for microbiome data via a zero-inflated quantile approach