Pinned Repositories
AnglePlanes-Extension
apidocs.slicer.org
This project hosts and serves the Slicer API documentation
AppLauncher
Simple and small program allowing to set the environment of any executable.
ChangeTrackerPy
Migration of ChangeTracker module from C++/Tcl Slicer3 to C++?/Python Slicer4
CompareVolumes
Slicer module providing high level layout and visualization options
CTK
A set of common support code for medical imaging, surgical navigation, and related purposes.
DashboardScripts
Collection of scripts used to configure/build/test/package 3D Slicer and associated extensions
DatabaseInteractorExtension
SlicerBrainVolumeRefinement
Extension for the Brain Volume Refinement methods (BVeR)
jamesobutler's Repositories
jamesobutler/SlicerBrainVolumeRefinement
Extension for the Brain Volume Refinement methods (BVeR)
jamesobutler/CTK
A set of common support code for medical imaging, surgical navigation, and related purposes.
jamesobutler/ExtensionsIndex
Slicer extensions index
jamesobutler/IGSIO
A collection of tools and algorithms for image guided systems
jamesobutler/ITK
Insight Toolkit (ITK) -- Official Repository
jamesobutler/LandmarkRegistration
An interactive registration tool that manages viewing and manipulating of sets of fiducials
jamesobutler/LesionSpotlightExtension
3D Slicer extension that provides T2-FLAIR MRI manipulation methods in order to increase contrast and segment hyperintense Multiple Sclerosis lesions
jamesobutler/ModelClip
An extension module designated to clip models with multiple planes.
jamesobutler/MONAI
AI Toolkit for Healthcare Imaging
jamesobutler/MONAILabel
MONAI Label is an intelligent open source image labeling and learning tool.
jamesobutler/PlusBuild
Plus is an open-source software toolkit for data acquisition, pre-processing, and calibration for navigated image-guided interventions.
jamesobutler/PlusLib
Plus is an open-source software toolkit for data acquisition, pre-processing, and calibration for navigated image-guided interventions.
jamesobutler/python-cmake-buildsystem
A cmake buildsystem for compiling Python
jamesobutler/PythonQt
CMake-ified version of PythonQt
jamesobutler/qt-easy-build
Scripts allowing to easily build Qt with OpenSSL support on Linux, MacOSX or Windows
jamesobutler/ROBEXBrainExtraction
3D Slicer extension to offer a brain extraction algorithm for MRI structural images. This extension has the ROBEX brain extraction implementation.
jamesobutler/SegmentationReview
Slicer3D extension for rating using Likert-type score Deep-learning generated segmentations, with segment editor funtionality. Created to speed up the validation process done by a clinician - the dataset loads in one batch with no need to load masks and volumes separately.
jamesobutler/ShapeVariationAnalyzer
Shape modeling and classification, extract shape features
jamesobutler/Slicer
Multi-platform, free open source software for visualization and image computing.
jamesobutler/Slicer-LesionSimulatorExtension
3D Slicer extension that provides a toolkit for Multiple Sclerosis lesion simulation in multimodal MRI images, such as T1, T2, T2-FLAIR and DTI scalar maps.
jamesobutler/Slicer-Liver
3D Slicer extension for liver analysis and therapy planning
jamesobutler/slicer.org
slicer.org website landing page
jamesobutler/SlicerCustomAppTemplate
Template to be used as a starting point for creating a custom 3D Slicer application
jamesobutler/SlicerExecutionModel
An open-source CMake-based project that provides macros and associated tools for the easy building of 3D Slicer command line interface (CLI) modules.
jamesobutler/SlicerMarkupsToModel
3D Slicer extension to create tube or closed surface model from markup fiducials
jamesobutler/SlicerRegularizedFastMarching
jamesobutler/SlicerSegmentEditorExtraEffects
Watershed segmentation effect for Segment Editor in 3D Slicer
jamesobutler/SlicerTotalSegmentator
Fully automatic total body segmentation in 3D Slicer using "TotalSegmentator" AI model
jamesobutler/TotalSegmentator
Tool for robust segmentation of >100 important anatomical structures in CT images
jamesobutler/vtkAddon
General-purpose features that may be integrated into VTK library in the future.