janniklasrose
Open Source enthusiast with a PhD in Computational Biophysics
@ImperialCollegeLondon Rotterdam, NL
Pinned Repositories
chebpy
A Python implementation of Chebfun
aerofoil-generator
Python scripts to generate aerofoil definitions
cell-morphing
Morphing algorithm to grow and shrink segmented cell objects
cell-packing
A packing algorithm for cells of arbitrary shape
diffusion-models
Analytical and random walk models of diffusion in permeable layered media
FV-RW-verification
Verifying Monte Carlo simulations using a finite volume method
github-flavored-markdown-to-html
Convert markdown to HTML using the GitHub API and some additional tweaks with Python. Comes with full formula support and image compression.
RayBox
An implementation of the Williams2005 ray-box intersection algorithm
RWcDTI
Random Walk for cardiac Diffusion Tensor Imaging
SVG-writer
MATLAB class to write SVG files
janniklasrose's Repositories
janniklasrose/RWcDTI
Random Walk for cardiac Diffusion Tensor Imaging
janniklasrose/diffusion-models
Analytical and random walk models of diffusion in permeable layered media
janniklasrose/github-flavored-markdown-to-html
Convert markdown to HTML using the GitHub API and some additional tweaks with Python. Comes with full formula support and image compression.
janniklasrose/SVG-writer
MATLAB class to write SVG files
janniklasrose/cell-morphing
Morphing algorithm to grow and shrink segmented cell objects
janniklasrose/cell-packing
A packing algorithm for cells of arbitrary shape
janniklasrose/FV-RW-verification
Verifying Monte Carlo simulations using a finite volume method
janniklasrose/AltaCV
Yet another alternative curriculum vitae/résumé class with LaTeX
janniklasrose/chebpy
A Python implementation of Chebfun
janniklasrose/chebroots
Recursively finding all roots of continuous functions using Chebyshev polynomials
janniklasrose/docker-duckdns
janniklasrose/doi
The small doi package for linking to doi.org
janniklasrose/DTpy
Diffusion tensor class in Python
janniklasrose/gh-pages-playground
GitHub Pages - Playground
janniklasrose/gitignore
A collection of useful .gitignore templates
janniklasrose/invenio-previewer
Invenio module for previewing files.
janniklasrose/janniklasrose
README for GitHub profile
janniklasrose/latexdiff
Compares two latex files and marks up significant differences between them. Releases on www.ctan.org and mirrors
janniklasrose/lumen-slicer
Methods to analyse lumina (tubular geometries) by slicing along their centreline
janniklasrose/maineagerie
A menagerie of Maine Coons
janniklasrose/matplotlib
matplotlib: plotting with Python
janniklasrose/microscopy-image-processing
Anything useful for dealing with microscopy images
janniklasrose/MMM-XKCD
MagicMirror² module to display the daily or random web comic of XKCD.
janniklasrose/pyvista
3D plotting and mesh analysis through a streamlined interface for the Visualization Toolkit (VTK)
janniklasrose/RNGen
MATLAB Random Number Generator
janniklasrose/seqgen
Diffusion MR Sequence Generation
janniklasrose/simple-icons
SVG icons for popular brands
janniklasrose/simplyCountdown.js
Tiny javascript CountDown library.
janniklasrose/siunitx
A comprehensive (SI) units package for LaTeX
janniklasrose/TracheAssistant
STAR-CCM+ Simulation Assistant for airway CFD simulations in human tracheas