jaredsampson
Working at the intersection of structural biology, molecular dynamics, and computational biophysics. Senior Scientist @Schrodinger; @Columbia PhD; @CWRU BA.
Schrodinger, IncNew York, NY
Pinned Repositories
ABangle
A tool for calculating and analysing the VH-VL orientation in antibodies.
bumpversion
Version-bump your software with a single command
pymol-scripts
Collected scripts for Pymol
pymolprobity
A MolProbity-style visualization plugin for PyMOL
vim-pymol
Vim plugin for working with PyMOL script (.pml) files.
jaredsampson's Repositories
jaredsampson/pymolprobity
A MolProbity-style visualization plugin for PyMOL
jaredsampson/ABangle
A tool for calculating and analysing the VH-VL orientation in antibodies.
jaredsampson/pymol-scripts
Collected scripts for Pymol
jaredsampson/vim-pymol
Vim plugin for working with PyMOL script (.pml) files.
jaredsampson/bumpversion
Version-bump your software with a single command
jaredsampson/ColumbiaDissertationTemplate
LaTeX template for a Columbia University doctoral dissertation
jaredsampson/ColumbiaLatexTemplate
LaTeX Template for Columbia University Dissertations
jaredsampson/cookiecutter-python-cli
jaredsampson/cowboy-dotfiles
My Ubuntu / OS X dotfiles.
jaredsampson/dotfiles-alrra
💻 macOS / Ubuntu dotfiles
jaredsampson/homebrew-cask
A CLI workflow for the administration of Mac applications distributed as binaries
jaredsampson/liondown
An updated R Markdown thesis template using the bookdown package
jaredsampson/mdtraj
A modern, open library for the analysis of molecular dynamics trajectories
jaredsampson/MolProbity
Protein and nucleic acid validation service
jaredsampson/plotnine
A grammar of graphics for Python
jaredsampson/PyCORN
A script to extract data from ÄKTA/UNICORN result-files (.res)
jaredsampson/pymol
Git version of Open Source PyMOL
jaredsampson/pymol-open-source
Open-source foundation of the user-sponsored PyMOL molecular visualization system.
jaredsampson/pymol-psico
Pymol ScrIpt COllection (PSICO)
jaredsampson/pymol-testing
PyMOL Testing Framework
jaredsampson/PyR4MDS
Companion code repository for the O'Reilly "Python and R for the Modern Data Scientist" book.
jaredsampson/rmarkdown_lecture
R Markdown lecture given for the Statistics for the Basic Sciences course at Columbia University.
jaredsampson/setup
Mac setup script
jaredsampson/strap
:boot: Bootstrap your macOS development system.
jaredsampson/strictyaml
Type-safe YAML parser and validator.
jaredsampson/toolkit-for-ynab
A general purpose YNAB enhancing browser extension for Chrome and Firefox. Have it your way!
jaredsampson/trackdown
R package for collaborative writing and editing of R Markdown (or Sweave) documents in Google Docs.