Pinned Repositories
cBioportalDataClawler
Some simple Python scripts to download data files from https://www.cbioportal.org/
genomics-exercise
Genomics exercise from Jason Wong lab @ HKU
HKU-Practical-Bioinformatics
LocusMasterTE
Integrating long read sequencing enhances short read-based locus-specific transposable element quantification
LocusMasterTE_paper
Scripts for figures and results in LocusMasterTE paper
MMR
RNAseq-analysis-pipeline
This guidebook aims to demonstrate the RNA-seq analysis pipeline and the basics statistical analysis behind Differential Gene expression detection
smk_sv
A snakemake pipeline to call structure variants from ONT data
TMB
Tumour mutation burden correction
withings_api_dev
Template for flask application to access Withings API
jasonwong-lab's Repositories
jasonwong-lab/LocusMasterTE
Integrating long read sequencing enhances short read-based locus-specific transposable element quantification
jasonwong-lab/smk_sv
A snakemake pipeline to call structure variants from ONT data
jasonwong-lab/TMB
Tumour mutation burden correction
jasonwong-lab/HKU-Practical-Bioinformatics
jasonwong-lab/RNAseq-analysis-pipeline
This guidebook aims to demonstrate the RNA-seq analysis pipeline and the basics statistical analysis behind Differential Gene expression detection
jasonwong-lab/cBioportalDataClawler
Some simple Python scripts to download data files from https://www.cbioportal.org/
jasonwong-lab/ERCC2
Scripts for Barbour et al. ERCC2 mutations alter the genomic distribution pattern of somatic mutations and are independently prognostic in bladder cancer
jasonwong-lab/genomics-exercise
Genomics exercise from Jason Wong lab @ HKU
jasonwong-lab/GenomicsWorkshop
jasonwong-lab/HKU_STEM
HKU STEM Data Science Lab for SARS-CoV2 bioinformatics
jasonwong-lab/LocusMasterTE_paper
Scripts for figures and results in LocusMasterTE paper
jasonwong-lab/MMR
jasonwong-lab/withings_api_dev
Template for flask application to access Withings API