/i2b2-quickstart

Quick automated installation of i2b2 in VMs, Amazon-Web-Service and Docker

Primary LanguageShell

installs i2b2 hive and webclient on centos vm, amazon webservice and Docker (see wiki for details)

To install i2b2 using docker containers from docker hub

see instructions in wiki at link

Quickstart (to install i2b2 from source code)

ssh to centos machine

sudo yum -y install git wget unzip patch bzip2 screen

screen

export IP_ADDRESS=[external IP ADDRESS or hostname]

git clone --depth=1 https://github.com/waghsk/i2b2-quickstart.git

cd i2b2-quickstart

sudo sh scripts/install/centos_first_install.sh $IP_ADDRESS 2>&1|tee first.log

Remember to use the public/external IP_ADDRESS of the instance in the cmd above.

To verify installation see: http://[ipaddress]/webclient/

see http://ipaddress/webclient/

Tips

to allow remote connections to database add

listen_addresses='*'

to /var/lib/pgsql9/data/postgresql.conf

To create i2b2 docker containers

sudo sh scripts/docker/run_docker_network.sh PUBLIC_IP