Pinned Repositories
boogiesync-tablet
A userspace linux driver for using the Boogie Board Sync 9.1 as a tablet input device
LinProg
Haskell library with EDSL for linear programming
malaria-variant-calling
static-nix
jbedo's Repositories
jbedo/boogiesync-tablet
A userspace linux driver for using the Boogie Board Sync 9.1 as a tablet input device
jbedo/static-nix
jbedo/LinProg
Haskell library with EDSL for linear programming
jbedo/malaria-variant-calling
jbedo/bam2fq
jbedo/bionix-example
jbedo/CountESS
CountESS
jbedo/GenomicSQLite
Genomics Extension for SQLite
jbedo/Milton-BioNix
This repo contains documentation for running BioNix on WEHI's Milton HPC.
jbedo/nixpkgs
Nix Packages collection
jbedo/octopus
Bayesian haplotype-based mutation calling
jbedo/pmt
Poisson Margin Test implementation in R
jbedo/PureR
jbedo/purer-arrays
jbedo/purer-control
jbedo/purer-effect
jbedo/purer-foldable-traversable
jbedo/purer-lazy
jbedo/purer-partial
jbedo/purer-prelude
jbedo/purer-refs
jbedo/purer-st
jbedo/purer-unfoldable
jbedo/purer-unsafe-coerce
jbedo/pysam
Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.
jbedo/quip
Compressing next-generation sequencing data with extreme prejudice.
jbedo/r-diff
Automatic differentiation for R
jbedo/rshells
jbedo/superSTR
A lightweight, alignment-free utility for detecting repeat-containing reads in short-read WGS, WES and RNA-seq data.