Pinned Repositories
OmicNavigator
Open-Source Software for Omic Data Analysis and Visualization
ReproducibleResearch
CRAN Task View: Reproducible Research
git-for-science
A quick introduction to version control with Git and GitHub
r-project-workflows
List of workflow tools for R projects
singleCellSeq
Batch effects and the effective design of single-cell gene expression studies
smk-simple-slurm
A simple Snakemake profile for Slurm without --cluster-config
workflowr
Organize your project into a research website
workflowr.io
Discover reproducible research projects created with workflowr
jdblischak's Repositories
jdblischak/smk-simple-slurm
A simple Snakemake profile for Slurm without --cluster-config
jdblischak/git-for-science
A quick introduction to version control with Git and GitHub
jdblischak/centralized-tiledb-nightlies
demo
jdblischak/TileDB-Vector-Search
Cloud-native vector similarity search and storage with efficient, serverless scale-out
jdblischak/arrow-cpp-feedstock
A conda-smithy repository for arrow-cpp.
jdblischak/bioconda-recipes
Conda recipes for the bioconda channel.
jdblischak/conda-forge-nightly-controller
jdblischak/gsDesign2
Group Sequential Design Under Non-Proportional Hazards
jdblischak/libtiledb-sql-feedstock
A conda-smithy repository for libtiledb-sql.
jdblischak/litedown
A lightweight version of R Markdown
jdblischak/OmicNavigator
Open-Source Software for Omic Data Analysis and Visualization
jdblischak/psm3mkv
psm3mkv: A package to evaluate the fit and efficiency of three state oncology cost-effectiveness model structures
jdblischak/r-knitr-feedstock
A conda-smithy repository for r-knitr.
jdblischak/r-rcppint64-feedstock
A conda-smithy repository for r-rcppint64.
jdblischak/r-tiledb-feedstock
A conda-smithy repository for r-tiledb.
jdblischak/simtrial
Clinical trial simulation for time-to-event endpoints
jdblischak/stanford-stats352-reproducibility
Demonstration of reproducible workflows for Stanford STATS 352
jdblischak/stats352-spotify
jdblischak/test-toc
jdblischak/TileDB
The Universal Storage Engine
jdblischak/tiledb-feedstock
A conda-smithy repository for tiledb.
jdblischak/TileDB-MariaDB
MyTile is a MariaDB storage engine for accessing TileDB arrays
jdblischak/TileDB-Py
Python interface to the TileDB storage engine
jdblischak/tiledb-py-feedstock
A conda-smithy repository for tiledb-py.
jdblischak/TileDB-R
R interface to the TileDB Universal Storage Engine
jdblischak/TileDB-SOMA
Python and R SOMA APIs using TileDB’s cloud-native format. Ideal for single-cell data at any scale.
jdblischak/TileDB-VCF
Efficient variant-call data storage and retrieval library using the TileDB storage library.
jdblischak/tiledb-vcf-feedstock
jdblischak/tiledb-vector-search-feedstock
jdblischak/tiledbsoma-feedstock
A conda-smithy repository for tiledbsoma.