Pinned Repositories
awesome-data-leadership
A curated list of awesome posts, videos, and articles on leading a data team (small and large)
Awesome-Product-Management
A curated list of Product Management Resources :seedling:
bcbb
Useful bioinformatics code, primarily in Python and R
biopython
Official git repository for Biopython (converted from CVS)
BUS_notebooks_python
curso-qgis-python
dgi-db
Rails frontend to The Genome Institute's drug gene interaction database.
PyVCF
A Variant Call Format reader for Python.
shiny
Easy interactive web applications with R
jdiez's Repositories
jdiez/PyVCF
A Variant Call Format reader for Python.
jdiez/shiny
Easy interactive web applications with R
jdiez/awesome-data-leadership
A curated list of awesome posts, videos, and articles on leading a data team (small and large)
jdiez/Awesome-Product-Management
A curated list of Product Management Resources :seedling:
jdiez/BUS_notebooks_python
jdiez/curso-qgis-python
jdiez/dgi-db
Rails frontend to The Genome Institute's drug gene interaction database.
jdiez/django-rest-framework
Awesome web-browseable Web APIs.
jdiez/ESRI_M_GIS
jdiez/gatk-protected
GATK Official Release Repository: contains the core MIT-licensed GATK framework, plus "protected" tools restricted to non-commercial use only
jdiez/gemini
a lightweight db framework for disease and population genetics.
jdiez/geocompr
Forthcoming book on geographic data with R
jdiez/hts-specs
Specifications of SAM/BAM and related high-throughput sequencing file formats
jdiez/illumina-utils
A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.7+ pipeline).
jdiez/jdiez.github.io
Personal website
jdiez/matplotlib
matplotlib: plotting with Python
jdiez/ngsutils
Tools for next-generation sequencing analysis
jdiez/oncotator
Large-file conversion with http://www.broadinstitute.org/oncotator
jdiez/pbt
jdiez/pybedtools
Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)
jdiez/rq
Simple job queues for Python
jdiez/rubra
Infrastructure code to support DNA pipeline
jdiez/seqtk
Toolkit for processing sequences in FASTA/Q formats
jdiez/simpsons-in-css
Simpsons characters in pure CSS
jdiez/tablefactory
Easily create HTML, spreadsheet, or PDF tables from common Python data sources
jdiez/tabulaRDF
Create RDF graphs from tabular data
jdiez/vcflib
a simple C++ library for parsing and manipulating VCF files, + many command-line utilities
jdiez/vcfnp
Load numpy arrays from VCF (variant call file)
jdiez/VcfPythonUtils
python utilities to work with Variant Call Format files (VCF)
jdiez/You-Dont-Know-JS
A book series on JavaScript. @YDKJS on twitter.