Pinned Repositories
perseuspy
Integration between Perseus and Python
PerseusR
R package for easy interop between Perseus and R
PluginInterop
Enables working with external scripts and tools from within Perseus
csv
Python script for command-line csv handling
fnf.python-starterkit
use python for the fast'n'furious challenge
fnf.theflash-python-pilot
goenrich
GO enrichment with python -- pandas meets networkx
Lanelet2
Map handling framework for automated driving
photon
PHOsphoproteomic dissecTiOn using Networks
uniprot
command-line and python interface to the uniprot database
jdrudolph's Repositories
jdrudolph/goenrich
GO enrichment with python -- pandas meets networkx
jdrudolph/photon
PHOsphoproteomic dissecTiOn using Networks
jdrudolph/uniprot
command-line and python interface to the uniprot database
jdrudolph/fnf.theflash-python-pilot
jdrudolph/csv
Python script for command-line csv handling
jdrudolph/fnf.python-starterkit
use python for the fast'n'furious challenge
jdrudolph/Lanelet2
Map handling framework for automated driving
jdrudolph/webgestalt
Automated GO enrichment analysis using Webgestalt
jdrudolph/eyerecorder
big-button macro recording and bookmarks
jdrudolph/CD4ML-Scenarios
Repository with sample code and instructions for "Continuous Intelligence" and "Continuous Delivery for Machine Learning: CD4ML" workshops
jdrudolph/compbio-base
A C# solution with projects containing utiliy classes that are used e.g. in MaxQuant and Perseus
jdrudolph/cytoscape-app-samples
Cytoscape 3 sample code for App developers.
jdrudolph/devtools
Tools to make an R developer's life easier
jdrudolph/eyewriter-chrome-ext
jdrudolph/fastcluster
:exclamation: This is a read-only mirror of the CRAN R package repository. fastcluster — Fast Hierarchical Clustering Routines for R and Python. Homepage: http://danifold.net/fastcluster.html
jdrudolph/landscraper
jdrudolph/lwc
last weeks commits -- markdown summary of commits from last week
jdrudolph/mindmaps-2-tex-converter
jdrudolph/ms-numpress
Implementations of compression schemes for numeric data from mass spectrometers.
jdrudolph/mypy
A collection of python tools
jdrudolph/networkx
Official NetworkX source code repository.
jdrudolph/pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
jdrudolph/perseus-plugins
The perseus software for the statistical analysis of omics data (http://www.perseus-framework.org/) has a plugin architecture. Here you find the code necessary to develop your own plugins.
jdrudolph/scikit-bio
scikit-bio is an open-source, BSD-licensed, Python package providing data structures, algorithms, and educational resources for bioinformatics.
jdrudolph/teamcity_agent_mono
TeamCity agent with mono installed
jdrudolph/uniprot_mapper
simple python script that provides a command-line interface to uniprot.org/mapping