Pinned Repositories
bioconda-recipes
Conda recipes for the bioconda channel.
chimclustr
configs
Config files used to define parameters specific to compute environments at different Institutions
fetchngs-to-cram
Pipeline to fetch metadata and raw FastQ files from public databases
flextable
table farming
Genes4Epilepsy
A curated list of monogenic epilepsy genes
grape
genomic relatedness detection pipeline
HaplotypR
hello
Classic hello world script in Nextflow language
wehi-nextflow-training
An introduction to developing and running Nextflow workflows at WEHI
jemunro's Repositories
jemunro/wehi-nextflow-training
An introduction to developing and running Nextflow workflows at WEHI
jemunro/bioconda-recipes
Conda recipes for the bioconda channel.
jemunro/chimclustr
jemunro/configs
Config files used to define parameters specific to compute environments at different Institutions
jemunro/fetchngs-to-cram
Pipeline to fetch metadata and raw FastQ files from public databases
jemunro/flextable
table farming
jemunro/Genes4Epilepsy
A curated list of monogenic epilepsy genes
jemunro/grape
genomic relatedness detection pipeline
jemunro/HaplotypR
jemunro/hello
Classic hello world script in Nextflow language
jemunro/hgnc
Download and import HGNC gene data into R
jemunro/IGV-snapshot-automator
Script to automatically create and run IGV snapshot batchscripts
jemunro/jfun
Miscellaneous tidy functions for R
jemunro/nextflow
A DSL for data-driven computational pipelines
jemunro/nf-lib
Library of groovy functions for import into nextflow pipelines
jemunro/proxmox_mosquitto_container
jemunro/PuTTY-Ubuntu-Theme
Ubtuntu theme for PuTTY client
jemunro/rnavar
RNA variant calling pipeline
jemunro/rstudio
RStudio is an integrated development environment (IDE) for R
jemunro/Rvsearch
jemunro/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
jemunro/Tidy-nf
Channel Operators for Nextflow inspired by the tidyverse packages from R
jemunro/tidyExt
handy wrapper functions for tidyverse
jemunro/vscode-language-nextflow
Nextflow language support for Visual Studio Editor
jemunro/WEHI_tidyR_course_book
Introduction to R - Tidyverse