jeremymsimon
Senior Research Scientist: Dana-Farber Cancer Institute Department of Data Science, Harvard T.H. Chan School of Public Health Department of Biostatistics
Boston, MA
Pinned Repositories
chromap_vs_cellranger_scATAC_exploration_10x
This site contains the code and results of my comparative analysis of chromap v0.1 vs cellranger-atac v2.0.0 in the processing and analysis of 10x scATAC-seq data
CoPublication_Networks
DFCI_HCSPH_email_signature
DS_scRNA_20240228
Department of Data Science intro to scRNAseq and data preprocessing workshop
GoogleMaps_BostonArea_Housing
Hamad_NRF2
Holville_Cul9
MouseCortex
SPLITseq
ssub
jeremymsimon's Repositories
jeremymsimon/MouseCortex
jeremymsimon/GoogleMaps_BostonArea_Housing
jeremymsimon/chromap_vs_cellranger_scATAC_exploration_10x
This site contains the code and results of my comparative analysis of chromap v0.1 vs cellranger-atac v2.0.0 in the processing and analysis of 10x scATAC-seq data
jeremymsimon/DS_scRNA_20240228
Department of Data Science intro to scRNAseq and data preprocessing workshop
jeremymsimon/HSPH_scRNA_20241023
jeremymsimon/SPLITseq
jeremymsimon/ssub
jeremymsimon/CoPublication_Networks
jeremymsimon/DFCI_HCSPH_email_signature
jeremymsimon/Hamad_NRF2
jeremymsimon/Holville_Cul9
jeremymsimon/Judson_UBE3A
This repository contains R code to generate some of the figures presented in Judson et al. 2021
jeremymsimon/Kim_TCF4
jeremymsimon/Li_HIV_HA15
jeremymsimon/MouseNeuronRASLseq
RASL-seq on 384 chemicals and combinations in mouse neuronal cultures, across 4 concentrations and both sexes
jeremymsimon/Mukherjee_DAB2IP
jeremymsimon/NBIO_Neuroanalytics_scRNAseq
jeremymsimon/Random-Scripts
Commonly used scripts for easy sharing
jeremymsimon/TCGA_BRCA_DEXSeq
jeremymsimon/Williams_Retina_scRNA_IMPG2_workflowr
jeremymsimon/Xing_Ube3a
jeremymsimon/Zhang_TCGA-KIRC_GDC_dCas9screen
jeremymsimon/Zylka_geneLength_binnedPlots