Pinned Repositories
slr_pipeline
Pipeline for mapping SLR results for Eutheria onto the available structures from PDB
sympy
My SymPy repository
jergosh's Repositories
jergosh/slr_pipeline
Pipeline for mapping SLR results for Eutheria onto the available structures from PDB
jergosh/sympy
My SymPy repository
jergosh/cluster
jergosh/gideon
jergosh/greg-ensembl
A repository of Greg's Ensembl perl stuff.
jergosh/homebrew
:beer: The missing package manager for OS X.
jergosh/msa
R package for multiple sequence alignment
jergosh/pipeline-transcriptome-de
Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads
jergosh/pyranges
(beta) Performant Pythonic GenomicRanges
jergosh/SLR
Sitewise Likelihood Ratio technique for detecting non-neutral selection
jergosh/swmutsel
Implementation of the site-wise mutation-selection model (swMutSel) described in Tamuri et al. Genetics. (2012, 2014)
jergosh/tdg09
Software and data used in Tamuri AU, dos Reis M, Hay AJ, Goldstein RA (2009) Identifying Changes in Selective Constraints: Host Shifts in Influenza. PLoS Comput Biol 5(11): e1000564 doi:10.1371/journal.pcbi.1000564