jerome-f

jerome-f's Stars

• skypilot-org/skypilot

  SkyPilot: Run AI and batch jobs on any infra (Kubernetes or 12+ clouds). Get unified execution, cost savings, and high GPU availability via a simple interface.

  Language:Python6.7k721.8k498

• openvinotoolkit/anomalib

  An anomaly detection library comprising state-of-the-art algorithms and features such as experiment management, hyper-parameter optimization, and edge inference.

  Language:Python3.8k38908672

• dblalock/bolt

  10x faster matrix and vector operations

  Language:C++2.5k4734171

• locuslab/convmixer

  Implementation of ConvMixer for "Patches Are All You Need? 🤷"

  Language:Python1.1k1416101

• aangelopoulos/conformal-prediction

  Lightweight, useful implementation of conformal prediction on real data.

  Language:Jupyter Notebook772131086

• BGU-CS-VIL/DeepDPM

  "DeepDPM: Deep Clustering With An Unknown Number of Clusters" [Ronen, Finder, and Freifeld, CVPR 2022]

  Language:Python76096075

• calico/basenji

  Sequential regulatory activity predictions with deep convolutional neural networks.

  Language:Python40030169122

• apple/ml-hierarchical-confusion-matrix

  Neo: Hierarchical Confusion Matrix Visualization (CHI 2022)

  Language:TypeScript30316629

• dair-ai/dair-ai.github.io

  Home of DAIR.AI

  Language:HTML209255624

• Cloufield/gwaslab

  A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/

  Language:Python15639925

• fauman/EGEA

  Every Gene Ever Annotated in published GWAS

  47314

• Genentech/polygraph

  Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of regulatory elements.

  Language:Jupyter Notebook27730

• MRC-Epid/pGWAS_discovery

  Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"

  Language:R23127

• refresh-bio/VCFShark

  Language:C++17212

• alexeyignatiev/xreason

  XReason - formal reasoning about explanations for ML models

  Language:Python16502

• medical-genomics-group/gVAMP

  Vector Approximate Message Passing inference framework for GWAS

  Language:C++14124

• insitro/AllelicSeries

  Implementation of gene-level rare coding variant association tests targeting allelic series: cases where increasingly deleterious mutations have increasingly large phenotypic effects.

  Language:R12321

• NVIDIA-Genomics-Research/GEPSi

  GEPSi simulates phenotypes for GWAS data based on a range of conditions and biological assumptions.

  Language:Python12737

• stephenslab/ldshrink

  ldshrink: a one-stop R package for shrinkage estimation of linkage disequilibrium

  Language:C++117351

• luo-xiaolong/GSC

  VCF compression tool

  Language:C5102

• LashaBuxo/Overlapping_genes_by_CDS

  Language:Python4100

• xiangli428/PrCaFineMapping

  Language:R2111

• seanq31/rhoBH

  Language:PostScript1100