jeskowagner
PhD student of genomics and cancer specializing in bioinformatics with a strong interest in pathogenesis.
University of EdinburghEdinburgh
Pinned Repositories
aneufinder
Find CNVs in single cell sequencing data.
anndata
Annotated data.
anndata-tutorials
Use cases for anndata.
cellextract-docker
Docker container for cellpose
clusterpval
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
jeskowagner's Repositories
jeskowagner/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
jeskowagner/aneufinder
Find CNVs in single cell sequencing data.
jeskowagner/anndata
Annotated data.
jeskowagner/anndata-tutorials
Use cases for anndata.
jeskowagner/cellextract-docker
Docker container for cellpose
jeskowagner/clusterpval
jeskowagner/conda
OS-agnostic, system-level binary package manager and ecosystem
jeskowagner/faim-hcs
Package to organize high content screening experiments.
jeskowagner/IGC-ADSWorkshop
Solving Data Science challenges at IGC Edinburgh
jeskowagner/jeskowagner.github.io
jeskowagner/lazyseurat
Import And Export File-Backed Seurat Data
jeskowagner/lazyseurat-shiny
Shiny template for using lazyseurat as data backend for single-cell RNA visualisation
jeskowagner/mutSigExtractor
An R package for extracting mutational signatures from vcf files
jeskowagner/python-novice-gapminder
Plotting and Programming in Python
jeskowagner/rightmove_scraper
jeskowagner/scanpy
Single-cell analysis in Python. Scales to >1M cells.
jeskowagner/scNOVA
scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis
jeskowagner/snakemake
This is the development home of the workflow management system Snakemake. For general information, see
jeskowagner/XIM
Computing the revised Chatterjee’s rank correlation