jessicasyu

Pinned Repositories

• abm-initialization-collection

  Collection of tasks for initializing ABM simulations

  Language:Python2420

• cell-abm-pipeline

  Simulation, analysis, and visualization workflows for cell-scale agent-based models

  Language:Python2430

• aics-shparam

  Language:Python20823

• ARCADE

  ARCADE: Agent-based model of heterogeneous cell populations in dynamic microenvironments

  Language:Java9601

• arcade-collection

  Collection of tasks for working with ARCADE

  Language:Python2520

• arcade_emergent_behavior

  Supporting code for doi:10.3389/fbioe.2020.00249

  Language:HTML10

• arcade_modeling_choices

  Supporting code for doi:10.1371/journal.pcbi.1011917

  Language:HTML20

• arcade_vascular_dynamics

  Supporting code for doi:10.1016/j.cels.2021.05.007

  Language:HTML10

• container-collection

  Collection of tasks for running containerized models

  Language:Python3360

• simulariumio

  Python package that converts simulation outputs to the format consumed by the Simularium viewer website

  Language:Python43

jessicasyu's Repositories