| File | Purpose | Notes |
|---|---|---|
get_from_dexcom.py |
Contains code to download CGM trace data from Dexcom Clarity using provider credentials, rank the patients using code in rank_patients.py and then opens Tableau CGM Dashboard_v4.twb to show the downloaded data. |
It uses the entries in dexcom_numbers.xls to determine which patients to full data for. The code that connects to Dexcom is commented out and instead the script pulls fake data from the fake_data folder. The first time you open the Tableau dashboard, you may have to manually update the location of the downloaded data (in the CGM Dashboard_v3.twb Files folder). |
R/app.R |
R Shiny Dashboard. You can run this via RStudio, or open it in your browser here: https://surfcovid19.shinyapps.io/TIDE_git/ | You can use the fake CGM data in the fake_data folder to populate the dashboard. |
simulate_cgm_trace.Rmd |
RMarkdown notebook that you can use to generate fake CGM traces that are similar to real datasets | Example outputs are available in the fake_data folder |
