jgoke

jgoke's Stars

• SvetlanaUP/Microbiome-etc-Podcasts

  This repo collects the list of podcasts related to microbiome science: science, microbiology and bioinformatics.

  164

• SvetlanaUP/Microbiome-conferences-c

  This repo collects the list of conferences/meetings/workshops etc. related to microbiome science and tools.

  455

• SvetlanaUP/A-microbiologist-wants-to-compute

  This repo collects the list of learning online resources related to microbiome computational science and tools.

  5211

• nasa/GeneLab_Data_Processing

  Language:Jupyter Notebook6543

• gem-pasteur/Integron_Finder

  Bioinformatics tool to find integrons in bacterial genomes

  Language:F*6722

• mschnetzer/scrollytell_arbeitszeit

  Language:CSS182

• Techfitlab/interactive_maps_in_r

  Language:R75

• thegenemyers/FASTGA

  Pairwise whole genome aligner

  Language:C1365

• genomicsITER/NanoCLUST

  NanoCLUST is an analysis pipeline for UMAP-based classification of amplicon-based full-length 16S rRNA nanopore reads

  Language:Nextflow10647

• thomasp85/ggplot2_workshop

  Material for "Drawing Anything with ggplot2" workshop

  494254

• CompEpigen/figeno

  Tool for plotting sequencing data along genomic coordinates.

  Language:Python2488

• hillerlab/GeneLossPipe

  Language:Perl237

• taylor-lindsay/phylogenetics

  A tutorial on making phylogenetic trees in python

  Language:Jupyter Notebook2015

• bpucker/PythonTUBS

  Python introduction for life scientists

  Language:Python448

• allie-walker/Natural-product-function

  scripts for predicting natural product activity from biosynthetic gene cluster sequences

  Language:Jupyter Notebook208

• quadram-institute-bioscience/socru

  Order and orientation of complete bacterial genomes

  Language:Python266

• leonardojo/ggPlantmap

  Language:R795

• cxli233/FriendsDontLetFriends

  Friends don't let friends make certain types of data visualization - What are they and why are they bad.

  Language:R6.4k233

• sbooeshaghi/single-cell-vocabulary

  254

• immunitastx/coding_exercise_TCGA_infiltration

  coding exercise using TCGA immune infiltration data

  4214

• Marcelpv96/Heart-Disease-UCI

  Complete analysis about heart disease uci dataset.

  Language:R2

• mongiardino/genesortR

  Sorting and subsampling phylogenomic datasets

  Language:R191

• loukesio/ggvolc

  𝐠𝐠𝐯𝐨𝐥𝐜 effortlessly translates differential expression datasets and RNAseq data into informative volcano plots. Highlight genes of interest with unprecedented ease. With just a single line of code, visualize complex datasets, gaining deeper insights and simplifying data representation

  Language:R604

• ColauttiLab/RCrashCourse_Book

  A GitBook version of the R Crash Course self-tutorials: https://colauttilab.github.io/RCrashCourse

  Language:HTML23725

• hadley/tidy-data

  A paper on data tidying

  Language:TeX420465

• pablo-arantes/making-it-rain

  Cloud-based molecular simulations for everyone

  Language:Rich Text Format388107

• pamellaccar/gromacs_with_packmol

  A fast and simple Molecular Dynamics tutorial using GROMACS and PACKMOL.

  Language:Makefile34

• nhs-r-community/rmarkdown_intro

  Slides and course material based on the RStudio communicate-rmd-workshop and NHS-R's intro-rmd

  Language:HTML71

• nhs-r-community/intro-git-github

  Introduction to Git and Github using RStudio and R

  Language:HTML123

• cc36/SingleCellAnalysisToolbox

  Language:Jupyter Notebook41