Pinned Repositories
asbmb
beautiful-jekyll
✨ Build a beautiful and simple website in literally minutes. Demo at https://beautifuljekyll.com
bioconda-recipes
Conda recipes for the bioconda channel.
DeepAccess
Code for training, testing, and motif extraction from multilabel DNA sequence ensemble of convolutional neural networks
deepaccess-package
Training an interpretation of ensemble of convolutional neural networks for multi-task functional genomic classification tasks.
gifford-align
HSSP_Python
For the HSSP course Intro to Python with Games
jhammelman.github.io
New Personal Website
ReprogrammingRecovery
Code for creating consensus motif database and performing motif enrichment
spatzie
Identification of enriched motif pairs from chromatin interaction data
jhammelman's Repositories
jhammelman/ReprogrammingRecovery
Code for creating consensus motif database and performing motif enrichment
jhammelman/spatzie
Identification of enriched motif pairs from chromatin interaction data
jhammelman/DeepAccess
Code for training, testing, and motif extraction from multilabel DNA sequence ensemble of convolutional neural networks
jhammelman/asbmb
jhammelman/beautiful-jekyll
✨ Build a beautiful and simple website in literally minutes. Demo at https://beautifuljekyll.com
jhammelman/bioconda-recipes
Conda recipes for the bioconda channel.
jhammelman/deepaccess-package
Training an interpretation of ensemble of convolutional neural networks for multi-task functional genomic classification tasks.
jhammelman/gifford-align
jhammelman/HSSP_Python
For the HSSP course Intro to Python with Games
jhammelman/jhammelman.github.io
New Personal Website
jhammelman/keras
Deep Learning for humans
jhammelman/MIAA-analysis
jhammelman/patrickandfrantonarethebestninjas
jhammelman/pysamstats
A fast Python and command-line utility for extracting simple statistics against genome positions based on sequence alignments from a SAM or BAM file.
jhammelman/scansite-tools
Scansite searches for motifs within proteins that are likely to be phosphorylated by specific protein kinases or bind to domains such as SH2 domains, 14-3-3 domains or PDZ domains.
jhammelman/sequnwinderPaper
jhammelman/visual-attribution
Pytorch Implementation of recent visual attribution methods for model interpretability