Pinned Repositories
BISC-ES-307-FinalProject
Final project for BISC/ES 307: Ecosystem Ecology in Fall 2020
BISC204_BioModeling
BISC 204: Biological Modeling is a course developed by Jackie Matthes at Wellesley College to introduce undergraduates to modeling for dynamic biological systems. The lab coding exercises were designed for sophomore/junior level undergraduates with no prior coding experience.
BISC307_EcosystemEcology
This repository contains the lab materials for an upper-level (juniors/seniors) undergraduate Ecosystem Ecology with Lab course taught at Wellesley College by Jackie Matthes. This course is cross-listed in Biological Sciences and Environmental Studies. Computer lab exercises in this course focus on mastering data science concepts from the R 'tidyverse' set of packages and are designed for students with no prior coding experience. Labs are spread over two weeks, so that most labs have an "A" section completed in week 1, and a "B" section for week 2.
canreflectance_flux_plsr
CMIP5_ESV_historicalPFTs
This set of code was developed to analyze differences between the CMIP5 piControl (pre-industrial control) modeled distributions of PFTs and the Euro-American settlement vegetation dataset for the upper Midwest through the northeastern United States.
Defoliation_StreamFlow
Using a Landsat defoliation data produce to assess the impact of moderate severity disturbance on water yield, yield:precipitation, and instantaneous streamflow at 102 stream gages in southern New England.
EAB_soilflux
Code and data to fully reproduce the analysis within: Matthes, J.H., A.K. Lang, F.V. Jevon, S.J. Russell. Tree stress and mortality from emerald ash borer does not systematically alter short-term soil carbon flux in a mixed northeastern U.S. forest. Submitted to Forests, 21 Dec 2017.
EcosysEco-FA20-Lab1
Lab 1 for BISC/ES 307: Ecosystem Ecology with Lab in Fall 2020 at Wellesley College.
evolution-populations
This shiny app runs simulations of the three population-level processes that can cause evolution: genetic drift, gene flow, and natural selection. It was developed as an instructional tool for BISC 111: Introductory Organismal Biology at Wellesley College. Instructional materials that accompany this shiny app are hosted by QUBES: [add link here once up].
LGR_GGA_soilflux
Code to calculate GHG chamber fluxes measured with the LGR Ultraportable Greenhouse Gas Analyzer.
jhmatthes's Repositories
jhmatthes/ED2-old
jhmatthes/ED_PalEON
Everything needed to run perform the PalEON ED runs
jhmatthes/pecan
The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.