Pinned Repositories
ari
:dancers: The Automated R Instructor
didactr
Tools for Creating Automated Courses
Documentation_and_Usability
This course covers the basics of creating documentation and tutorials to maximize the usability of informatics tools. It is meant for individuals developing tools for informatics.
intro_to_r
A 2-week introduction to R programming course, with a focus on public health datasets
matahari
🔎 I Spy With My Little Eye
ottr-reports
For report checks for OTTR Github Actions.
OTTR_Template
OTTR for making courses! This is a template repo that helps people write 1 course but publish it in three places. Rendered example: https://jhudatascience.org/OTTR_Template/
Reproducibility_in_Cancer_Informatics
This course introduces the concepts of reproducibility and replicability in the context of cancer informatics. It is the first course in a two part course on reproducibility. It uses hands-on exercises to demonstrate in practical terms how to increase the reproducibility of data analyses.
text2speech
Text to Speech
tidyversecourse
Tidyverse Skills for Data Science in R
jhudsl's Repositories
jhudsl/OTTR_Template
OTTR for making courses! This is a template repo that helps people write 1 course but publish it in three places. Rendered example: https://jhudatascience.org/OTTR_Template/
jhudsl/intro_to_r
A 2-week introduction to R programming course, with a focus on public health datasets
jhudsl/jhudsl.github.io
source code for the JHU Data Science Lab website
jhudsl/Adv_Reproducibility_in_Cancer_Informatics
This course introduces more advanced tools to increase the reproducibility of data analyses; building upon the Intro to Reproducibility course. GitHub, Docker, Code Review, and GitHub actions are discussed.
jhudsl/ottrpal
Tools for converting OTTR courses into Leanpub or Coursera courses :otter:
jhudsl/Computing_for_Cancer_Informatics
This course is designed to help investigators understand more about computing basics, as well as familiarize researchers with various computing platform options.
jhudsl/Informatics_Research_Leadership
This course covers the pitfalls of informatics research and discusses best practices and tools to overcome the challenges of working with and managing multidisciplinary teams. It also covers guidelines to promote diversity and inclusion in your lab and research.
jhudsl/OTTR_Template_Website
Template to create websites with checks for broken urls and spelling, as well as automated rendering. The rendered site can be found here: https://jhudatascience.org/OTTR_Template_Website/
jhudsl/Reproducibility_in_Cancer_Informatics
This course introduces the concepts of reproducibility and replicability in the context of cancer informatics. It is the first course in a two part course on reproducibility. It uses hands-on exercises to demonstrate in practical terms how to increase the reproducibility of data analyses.
jhudsl/AnVIL_Book_Getting_Started
A guide for getting started using AnVIL
jhudsl/BCDS_LWV_2023
jhudsl/Cancer_Informatics_Data_Visualization
jhudsl/coqui
Coqui R Wrapper
jhudsl/Documentation_and_Usability
This course covers the basics of creating documentation and tutorials to maximize the usability of informatics tools. It is meant for individuals developing tools for informatics.
jhudsl/ITN_computing_resources
jhudsl/ottr-reports
For report checks for OTTR Github Actions.
jhudsl/AnVIL_Book_Champions
One-stop resource for AnVIL Champions
jhudsl/AnVIL_CoFests_2024
Information about AnVIL Community Conference CoFest Sessions - November 2024
jhudsl/AnVIL_Phylogenetic-Techniques
A semester-long course on the basics of molecular phylogenetic techniques
jhudsl/AnVIL_Template
An OTTR spinoff template for creating AnVIL content
jhudsl/Baltimore_nonprofits_assets
Analysis to accompany article by Tyler Derreth et al. "Serving a Segregated City: An Analysis of Nonprofit Locations in Baltimore "
jhudsl/Cancer_Genome_Informatics
jhudsl/cheatsheets
jhudsl/Data_Management_for_Cancer_Research
jhudsl/Dissemination_and_Engagement
jhudsl/Machine_Learning_for_Cancer_Informatics
jhudsl/ottr-docker
Manages dockerfiles and related images available for use with OTTR
jhudsl/OTTR_Quizzes
A template for companion repo for OTTR courses that require quizzes to be kept private
jhudsl/ottrproject.org
This repo publishes ottrproject.org
jhudsl/template-test