Error in graphics layout while performing GWAS using GAPIT

[vikram207]

I have been trying to run GWAS using GAPIT and I keep getting this error for past few days:

[1] "--------------------- Welcome to GAPIT ----------------------------"
[1] "Blink"
[1] "--------------------Processing traits----------------------------------"
[1] "Phenotype provided!"
[1] "The 1 model in all."
[1] "BLINK"
[1] "GAPIT.DP in process..."
[1] "Converting genotype..."
[1] "Converting HapMap format to numerical under model of Middle"
[1] "Perform numericalization"
[1] "Succesfuly finished converting HapMap which has bits of 2"
[1] "Converting genotype done."
[1] "GAPIT will filter marker with MAF setting !!"
[1] "The markers will be filtered by SNP.MAF: 0"
maf_index
TRUE
21033
[1] "Calculating kinship..."
[1] "Number of individuals and SNPs are 587 and 21033"
[1] "Kinship created!"
[1] "Calling prcomp..."
[1] "Creating PCA graphs..."
[1] "Joining taxa..."
[1] "Exporting PCs..."
[1] "PC created"
[1] "Filting marker for GAPIT.Genotype.View function ..."
Error in graphics::layout(p, ...) :
argument "p" is missing, with no default
In addition: There were 50 or more warnings (use warnings() to see the first 50)

I thought the error was due to problems with my data. But tutorial data leads to the same error. Can somebody provide a solution to this error?

[jiabowang]

I have not seen this error with demo data. Please see whether the pdf files were open when the GAPIT ran. and update your R and packages.

[zhen0506]

I am getting the same error. Did you figure out the reason?