jiabowang/GAPIT

sBLUP

majidipk opened this issue · 1 comments

Hello,
I am getting the following error when using the following command.
I would appreciate it if you could guide me.

#sBLUP used SUPER method to build psedue QTN kinship matrix. The code is:

myGAPIT_sBLUP <- GAPIT(
Y=myY[,c(1,2:56)],
GD=myGD,
GM=myGM,
model="sBLUP",
PCA.total=5,
file.output=T
)

1] "--------------------Final results presentations------------------------"
[1] "Generating summary"
[1] "Genomic Breeding Values (GBV) ..."
Error in t(KWO) %% MASS::ginv(as.matrix(KW)) %% UW :
requires numeric/complex matrix/vector arguments
In addition: There were 45 warnings (use warnings() to see them)
Error in t(KWO) %% MASS::ginv(as.matrix(KW)) %% UW :
requires numeric/complex matrix/vector arguments

Please check your phenotype. Whether are there no phenotype values for the reference population.
Or send your data with me, and I can help to figure out the reason.