jibikbam/SliceLabeler

Browser-based GUI for labeling MRI volumes and slices.

Requirements:

Python 3.6 or higher is needed.

Installation:

First, clone the repo and cd into the new directory.

Then, create a python virtual environment and install the dependencies:

Mac/Linux:

python3 -m venv venv
source venv/bin/activate
pip3 install -r requirements.txt

Windows CMD:

python3 -m venv venv
venv\Scripts\activate.bat
pip3 install -r requirements.txt

Usage:

Mac/Linux:

source venv/bin/activate
export FLASK_APP=application.py
flask run

Windows CMD:

venv\Scripts\activate.bat
set FLASK_APP=application.py
flask run

To deactivate the virtual environment when you're done:

deactivate

See also:

• Venv documentation
• Flask documentation