Pinned Repositories
Genetics-2016-PopulationGenomics
Scripts for Wang et al (2016) Natural Selection and Recombination Rate Variation Shape Nucleotide Polymorphism Across the Genomes of Three Related Populus Species. Genetics, 202(3), 1185-1200.
GenomeBiology-2018-PhotoperiodLocalAdaptation
Scripts for Wang et al. (2018) "A major locus controls local adaptation and adaptive life history variation in a perennial plant". Genome Biology, 19, 72.
MBE-2016-AllopatricSpeciation
Scripts for Wang et al. (2016). Variation in linked selection and recombination drive genomic divergence during allopatric speciation of European and American aspens. Molecular Biology and Evolution. 33(7), 1754-1767
Orychophragmus_metabolome_transcriptome
Scripts for Jia et al. (2023) Intergrative metabolomic and transcriptomic analyses reveal the potential regulatory mechanism of unique dihydroxy fatty acid biosynthesis in the seeds of an industrial oilseed crop Orychophragmus violaceus. unpublished
PLoSGenet-2017-eQTL-gene
Scripts (population genetics part) for Mähler et al. (2017) Gene co-expression network connectivity is an important determinant of selective constraint. 13(4), e1006402
PNAS-2018-AspenGenome
Scripts (population genetics part) for Lin, Wang, Delhomme et al. (2018) Functional and evolutionary genomic inferences in Populus through genome and population sequencing of American and European aspen. PNAS, 115(46), E10970-E10978
Populus-Genomic-Consequences-of-Hybridization
Populus_genomic_prediction_climate_vulnerability
Populus_superpangenome
Scripts for Shi et al. (2024). The suer-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread forest trees
Widespread-linked-selection
Scripts for Wang et al (2020) Evidence for widespread selection in shaping the genomic landscape during speciation of Populus.
jingwanglab's Repositories
jingwanglab/Populus_genomic_prediction_climate_vulnerability
jingwanglab/Populus-Genomic-Consequences-of-Hybridization
jingwanglab/Widespread-linked-selection
Scripts for Wang et al (2020) Evidence for widespread selection in shaping the genomic landscape during speciation of Populus.
jingwanglab/Populus_superpangenome
Scripts for Shi et al. (2024). The suer-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread forest trees
jingwanglab/Genetics-2016-PopulationGenomics
Scripts for Wang et al (2016) Natural Selection and Recombination Rate Variation Shape Nucleotide Polymorphism Across the Genomes of Three Related Populus Species. Genetics, 202(3), 1185-1200.
jingwanglab/GenomeBiology-2018-PhotoperiodLocalAdaptation
Scripts for Wang et al. (2018) "A major locus controls local adaptation and adaptive life history variation in a perennial plant". Genome Biology, 19, 72.
jingwanglab/MBE-2016-AllopatricSpeciation
Scripts for Wang et al. (2016). Variation in linked selection and recombination drive genomic divergence during allopatric speciation of European and American aspens. Molecular Biology and Evolution. 33(7), 1754-1767
jingwanglab/Orychophragmus_metabolome_transcriptome
Scripts for Jia et al. (2023) Intergrative metabolomic and transcriptomic analyses reveal the potential regulatory mechanism of unique dihydroxy fatty acid biosynthesis in the seeds of an industrial oilseed crop Orychophragmus violaceus. unpublished
jingwanglab/PLoSGenet-2017-eQTL-gene
Scripts (population genetics part) for Mähler et al. (2017) Gene co-expression network connectivity is an important determinant of selective constraint. 13(4), e1006402
jingwanglab/PNAS-2018-AspenGenome
Scripts (population genetics part) for Lin, Wang, Delhomme et al. (2018) Functional and evolutionary genomic inferences in Populus through genome and population sequencing of American and European aspen. PNAS, 115(46), E10970-E10978