jlt3
Scientist at the Frederick National Lab for Cancer Research PhD - Florida State University 2023
Frederick National Lab for Cancer ResearchFrederick, MD
Pinned Repositories
dcHiC
dcHiC: Differential compartment analysis for Hi-C datasets
ERCEs_2023
Scripts from Turner et al 2023 "Master transcription factor binding sites are necessary for early replication control element activity"
genmat
GENomic MATrices in R
MACS
MACS -- Model-based Analysis of ChIP-Seq
NGSscripts
Scripts for processing NGS data
SNPsplit
Allele-specific alignment sorting
TrimGalore
A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data
jlt3's Repositories
jlt3/dcHiC
dcHiC: Differential compartment analysis for Hi-C datasets
jlt3/ERCEs_2023
Scripts from Turner et al 2023 "Master transcription factor binding sites are necessary for early replication control element activity"
jlt3/genmat
GENomic MATrices in R
jlt3/MACS
MACS -- Model-based Analysis of ChIP-Seq
jlt3/NGSscripts
Scripts for processing NGS data
jlt3/SNPsplit
Allele-specific alignment sorting
jlt3/TrimGalore
A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data