jmchan88

Pinned Repositories

ChromatinHD
High-definition modeling of chromatin + transcriptomics data
Language:Python17 2 60
Lineage_Plasticity_in_CRPC
Language:Jupyter Notebook7 3 03
SCLC_atlas-HTAN
Single-cell atlas of SCLC leveraging scRNA-seq, MIBI, and Vectra imaging, as part of the Human Tumor Atlas Network
Language:Jupyter Notebook7 3 36
velocyto_mapping
Language:Python0 5 00
ArchR
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
Language:R376 14 1.1k133
sopa
Technology-invariant pipeline for spatial omics analysis (Xenium / MERSCOPE / CosMx / PhenoCycler / MACSima / Hyperion) that scales to millions of cells
Language:Python114 7 8411
hello-world
hello world
0 1 00
scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
Language:Python0 0 00
nf-scrnaseq
Language:Python01

jmchan88's Repositories

jmchan88/hello-world
hello world
0 1 00
jmchan88/scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
Language:Python0 0 00