Pinned Repositories
ACAT
castle
efficient-evolution
Efficient evolution from protein language models
environment
leafcutter
Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae Kyung Im, Jonathan K. Pritchard
mageck_nest
NICHES
Niche Interactions and Cellular Heterogeneity in Extracellular Signaling
nucleotide-transformer
🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics
rnaseq
standard-files
jmerkin's Repositories
jmerkin/castle
jmerkin/rnaseq
jmerkin/standard-files
jmerkin/ACAT
jmerkin/efficient-evolution
Efficient evolution from protein language models
jmerkin/environment
jmerkin/leafcutter
Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae Kyung Im, Jonathan K. Pritchard
jmerkin/mageck_nest
jmerkin/NICHES
Niche Interactions and Cellular Heterogeneity in Extracellular Signaling
jmerkin/nucleotide-transformer
🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics
jmerkin/scBERT
jmerkin/ScreenBEAM
Gene-level meta-analysis of high-throughput functional genomics (RNAi or CRISPR) screens.