Pinned Repositories
ABC-Enhancer-Gene-Prediction
Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)
ABC-Enhancer-Gene-Prediction-20250314-archive
Backup of https://github.com/broadinstitute/ABC-Enhancer-Gene-Prediction with full commit history. Please visit that repository for the most recent pipeline.
ABC-GWAS-Paper
Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021
cmap_analyses
A collection of analyses run on CMAP
cell_line_diversity
dpeak_v2
genome_arch
mpra
optparse
R package providing a commandline optional argument parser
jnasser3's Repositories
jnasser3/cell_line_diversity
jnasser3/dpeak_v2
jnasser3/genome_arch
jnasser3/mpra
jnasser3/optparse
R package providing a commandline optional argument parser