jng2

Pinned Repositories

CLUMP
CLUstering by Mutation Position
Language:Python00
COMPBIO
Final Project
Language:Python00
DrW_myrepo
Language:Python00
igv
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
Language:Java00
SeqDiff_RNA
Language:Python14
ACES
ACES is a workflow to query small sequences in a large set of genomes. It provides several outputs including BLAST results, a multiple sequence alignment file, a graphical fragment assembly file, and a phylogenetic tree file.
Language:Python5 3 10
GPU_accelerated_de_novo_workflow
HARE is the GPU workflow of the HAT https://github.com/TNTurnerLab/HAT tools.
Language:Shell4 3 00
Hare
A de novo variant caller leveraging Parabricks GPU accelerated variant calling
Language:Python6 2 00
HAT
HAT is a set of tools for calling de novo variants from whole-genome sequencing data.
Language:Python23 2 10
Tortoise
Tortoise is the CPU workflow of the HAT https://github.com/TNTurnerLab/HAT tools.
Language:Python5 2 20

jng2's Repositories

jng2/SeqDiff_RNA
Language:Python14
jng2/CLUMP
CLUstering by Mutation Position
Language:Python00
jng2/COMPBIO
Final Project
Language:Python00
jng2/DrW_myrepo
Language:Python00
jng2/igv
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
Language:Java00