Pinned Repositories
byb_2019
CaImAn
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
cell_gui
A graphical user interface for annotating cells in 3d.
course-content-dl
cshl2019
CSHL2023_projector_camera_maping
holo_project
Code for holographic optogenetic control of neuron activity - accompanying the paper Dal Maschio, Donovan et. al.
optical_threads_for_CAD
Adds common optical threads to Fusion360
pydata-talk_multidim-data-analysis
Joe's talk on multidimensional analysis from Munich Pydata 2018_07_11- https://www.meetup.com/PyData-Munchen/events/252446956/
superpythontalks-daskpipelines
Super Python Talks for Life Sciences - Python pipelines for data analysis
joe311's Repositories
joe311/superpythontalks-daskpipelines
Super Python Talks for Life Sciences - Python pipelines for data analysis
joe311/holo_project
Code for holographic optogenetic control of neuron activity - accompanying the paper Dal Maschio, Donovan et. al.
joe311/optical_threads_for_CAD
Adds common optical threads to Fusion360
joe311/pydata-talk_multidim-data-analysis
Joe's talk on multidimensional analysis from Munich Pydata 2018_07_11- https://www.meetup.com/PyData-Munchen/events/252446956/
joe311/byb_2019
joe311/CaImAn
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
joe311/cell_gui
A graphical user interface for annotating cells in 3d.
joe311/course-content-dl
joe311/cshl2019
joe311/CSHL2023_projector_camera_maping
joe311/dm_control
joe311/eye_tracker
Old eye tracking code for code review
joe311/FishExplorer
interactive analysis of calcium imaging data from larval zebrafish
joe311/greedypy
Greedy weak diffeomorphic image registration in Python
joe311/imaging_data_sim
Straightforward vectorized simulation of calcium imaging data
joe311/lightsheet_control
joe311/linear_algebra_workshop
Lisbon 2022
joe311/matplotlib
matplotlib: plotting with Python
joe311/Matrix_Reordering
joe311/vispy
Main repository for Vispy