/ProteinPrediction

Predict the sub-cellular location of a protein based only on its primary structure. (Best correction at 61%)

Primary LanguagePython

ProteinPrediction

Predict the sub-cellular location of a protein based only on its primary structure. (Best correction at 61%)

Find out how

1. Use file directly:

  • Open ./src/new_data.py with PyCharm (or just any editor you prefer).
  • Change contents in nd = NewData([...]).
  • Right click and 'Run' (PyCharm).

2. Command line:

  • Haven't supported yet, but DIY is rather simple. :)

3. Use as a class:

  • From src.new_data import NewData.
  • Instantiate a NewData object with a list of sequences you want to classify.
  • nd.predict() (suppose nd is your object in the first step) gives you the result and the confidence of prediction in the format of ((Result-1, Confidence-1),(Result-2, Confidence-2),...)

Questions

Please submit an Issue.

John Theo

2018-06-13