johndef64
I’m John, a computational biologist. My journey is a blend of reality and dreams, navigating the delicate interface where science and imagination converge.
Pinned Repositories
bertopic_graph
This repo offers a workflow dedicated to utilizing BERTopic for Semantic Graph-based information retrieval in nutrigenomics. It includes Jupyter notebooks on topic modeling and semantic graph creation, aimed at enhance genetic literature exploration. Ideal for genomic researchers, it simplifies the analysis of nutrition-related genetic information.
GRPM_system
Computational Strategies in Nutrigenetics: Constructing a Reference Dataset of Nutrition-Associated Genetic Polymorphisms https://doi.org/10.1101/2023.08.04.23293659
pychatgpt
pychatgpt is a small and useful Python module that provides functions for interacting with OpenAI's GPT models to create conversational agents. This module allows users to have interactive conversations with the GPT models and keeps track of the conversation history in your Python Projects and Jupyter Notebooks.
pyutilities_datascience
johndef64's Repositories
johndef64/pychatgpt
pychatgpt is a small and useful Python module that provides functions for interacting with OpenAI's GPT models to create conversational agents. This module allows users to have interactive conversations with the GPT models and keeps track of the conversation history in your Python Projects and Jupyter Notebooks.
johndef64/GRPM_system
Computational Strategies in Nutrigenetics: Constructing a Reference Dataset of Nutrition-Associated Genetic Polymorphisms https://doi.org/10.1101/2023.08.04.23293659
johndef64/bertopic_graph
This repo offers a workflow dedicated to utilizing BERTopic for Semantic Graph-based information retrieval in nutrigenomics. It includes Jupyter notebooks on topic modeling and semantic graph creation, aimed at enhance genetic literature exploration. Ideal for genomic researchers, it simplifies the analysis of nutrition-related genetic information.
johndef64/pyutilities_datascience
johndef64/grpm_bertopic
johndef64/GRPM_trial_data
johndef64/johndef64.github.io
johndef64/semantic_enrichment_golph3
johndef64/test_docker_jupyter_conda_torch