Pinned Repositories
anon-files
ansible
ansible-merge-tool
ansible_iptables_raw
iptables module for Ansible which keeps state
clojure-koans
A set of exercises for learning Clojure
deployer
A really basic tool (that should have been a bash script) to deploy dev builds in an incredibly specific way. You probably aren't interested in this
docker-samtools-bowtie2-tophat
docker-speedseq
Dockerfile for speedseq
jobrunner
A service for running jobs on a system over an HTTP+JSON API
johnworth's Repositories
johnworth/deployer
A really basic tool (that should have been a bash script) to deploy dev builds in an incredibly specific way. You probably aren't interested in this
johnworth/docker-speedseq
Dockerfile for speedseq
johnworth/jobrunner
A service for running jobs on a system over an HTTP+JSON API
johnworth/bulktagger
Basic command-line tool for tagging and pushing multiple Docker images at once.
johnworth/cas-extensions
johnworth/curl-wrapper
johnworth/DE
The CyVerse Discovery Environment
johnworth/DEB_docker
docker on vagrant
johnworth/DiscoveryEnvironmentBackend
All of the backend code for the Discovery Environment in a single repository.
johnworth/docker-doge
johnworth/docker-mesos
johnworth/dockerize_cegma
dockerize cegma version 2.5
johnworth/dockerize_cufflinks
dockerize cufflinks v2.2.1
johnworth/dockerize_edgeR
dockerize edgeR in R
johnworth/dockerize_fast-lmm_2.07
dockerize fast-lmm version 2.07
johnworth/dockerize_fastq
dockerize fastq_toolkit0.0.12
johnworth/dockerize_muscle
dockerize muscle3.8.31 linux 64
johnworth/dockerize_newbler
dockerize newbler 2.9.0
johnworth/dockerize_samtools
dockermize the samtools
johnworth/dockerize_SOAPdenovo2
dockerize SOAPdenove 2.04
johnworth/dockerize_tophat
dockerize the tophat
johnworth/dockerize_tophat1.4.1
dockerize tophat 1.4.1
johnworth/dockerize_trinity
dockerize trinity q20140413
johnworth/dockerize_velveth
dockerize velveth 1.2.10
johnworth/fester
johnworth/fig-elk
The ELK stack powered by Docker and Docker-compose.
johnworth/fsserver
A simplistic file server that includes support for web callbacks that fire on file changes.
johnworth/image-lister
johnworth/scripts
johnworth/speedseq
Rapid alignment and variant calling pipeline