Cannot use TCSS with GO_similarity
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lillianhorin commented
Hello,
I hope all is well! I am using GO_similarity
to compute a similarity matrix but am getting the following error.
Error in (function (ID1, ID2, semData) :
tcssdata not found, please re-generate your `semData` with `tcssprocess = TRUE`...
I am trying to enable TCSS through the following code, but am not sure where I can pass the semdata
into the GO_similarity
function.
semData <- godata( 'org.Hs.eg.db',
keytype = 'ENSEMBL',
ont = 'BP',
processTCSS = TRUE)
Your help on this would be greatly appreciated! Thank you.