Pinned Repositories
acn-r-exercises
AdventOfCode21
My sporadic attempts to participate in https://adventofcode.com/2021/...
BayesPrism
A Fully Bayesian Inference of Tumor Microenvironment composition and gene expression
book
dbp-exercises
deconvR
The deconvR is an R package designed for analyzing deconvolution of the bulk sample(s) using an atlas of reference omic signature profiles and a user-selected model.
easy-entrez
Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.
guix.install
Install (and import) R packages with Guix from within your R session
Phenological-shifts-germany
pigx_sars-cov-2
PiGx SARS-CoV-2 wastewater sequencing pipeline
jonasfreimuth's Repositories
jonasfreimuth/acn-r-exercises
jonasfreimuth/AdventOfCode21
My sporadic attempts to participate in https://adventofcode.com/2021/...
jonasfreimuth/BayesPrism
A Fully Bayesian Inference of Tumor Microenvironment composition and gene expression
jonasfreimuth/book
jonasfreimuth/dbp-exercises
jonasfreimuth/deconvR
The deconvR is an R package designed for analyzing deconvolution of the bulk sample(s) using an atlas of reference omic signature profiles and a user-selected model.
jonasfreimuth/easy-entrez
Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.
jonasfreimuth/guix.install
Install (and import) R packages with Guix from within your R session
jonasfreimuth/Phenological-shifts-germany
jonasfreimuth/pigx_sars-cov-2
PiGx SARS-CoV-2 wastewater sequencing pipeline
jonasfreimuth/intro2UnixandSGE
resource for unix and SGE beginners
jonasfreimuth/jonasfreimuth
Config files for my GitHub profile.
jonasfreimuth/ml-exercises
jonasfreimuth/pigx-common
Common infrastructure used by all PiGx pipelines
jonasfreimuth/pigx-databases
Small database archives used for testing by the pigx-sars-cov-2 pipeline. May disappear at any point.
jonasfreimuth/pigx_docs
Documentation for PiGx
jonasfreimuth/prog-expertise-exercises
jonasfreimuth/quant-gen-exercises
jonasfreimuth/stbi-exercises
jonasfreimuth/sudo
Mattermost bot
jonasfreimuth/TCGAWorkflow
TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages