jonathanronen
Machine Learning Researcher • Computational Biologist • Data Scientist • Software Developer
Berlin Institute for Medical Systems BiologyBerlin, Germany
Pinned Repositories
maui
Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit
netSmooth
netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation
pigx_rnaseq
Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline
lifelines
Survival analysis in Python
ml101-biebola
Code, slides and data for Naive Bayes tweets classification tutorial for NYU Special Topics in Computer Science, 2014
pynrnmf
Python implementation of Network Regularized Non-Negative Matrix Factorization
seinfeldvision
GPT-2 fine-tuned on seinfeld
twitter-authorizer
Twitter app to collect tokens from users
tweepy
Twitter for Python!
jonathanronen's Repositories
jonathanronen/seinfeldvision
GPT-2 fine-tuned on seinfeld
jonathanronen/pynrnmf
Python implementation of Network Regularized Non-Negative Matrix Factorization
jonathanronen/ml101-biebola
Code, slides and data for Naive Bayes tweets classification tutorial for NYU Special Topics in Computer Science, 2014
jonathanronen/twitter-authorizer
Twitter app to collect tokens from users
jonathanronen/hdo-site
Rails prototype of HDO
jonathanronen/Letterpress
A minimal, Markdown based blogging system written in Python.
jonathanronen/toymq
A little toy MQ I use for some personal things when an app needs to be (just barely) distributed.
jonathanronen/bimsbbioinfo.github.io
website for the platform
jonathanronen/book
jonathanronen/compGenomRData
Data for book
jonathanronen/conf2017slides
jonathanronen/exercises
jonathanronen/flask-restplus
Fully featured framework for fast, easy and documented API development with Flask
jonathanronen/gmail
A Pythonic interface for Google Mail
jonathanronen/hierclust
A ruby library for performing simple hierarchical clustering of spatial data.
jonathanronen/jonathanronen.com
jonathanronen/jonathanronen.github.io
jonathanronen/kandan
Kandan is an Open Source Alternative to HipChat
jonathanronen/lifelines
Survival analysis in Python
jonathanronen/mongo-munin
Munin plugins for MongoDB
jonathanronen/pyonalib
A python library
jonathanronen/pystringdb-client
Simple python client for the STRING db api (string-db.org)
jonathanronen/R-build
Compile and install R, based on ruby-build
jonathanronen/smapp-anes-facebook-survey-addon
SMaPP Facebook Sign-on
jonathanronen/tweepy
Twitter for Python!