jonclayden
Image processing, scientific computing and data science, mostly with R and C++
University College LondonUnited Kingdom
Pinned Repositories
divest
Get images out of DICOM format quickly
imbibe
A Pipe-Friendly Image Calculator
mmand
Mathematical Morphology in Any Number of Dimensions
multicore
Git clone of the "multicore" SVN repo on rforge.net
ore
An R interface to the Onigmo regular expression library
R-Nova
R Interoperability for Nova
RNifti
Fast R and C++ access to NIfTI images
RNiftyReg
An R interface to the NiftyReg medical image registration library
shades
Simple colour manipulation in R
tractor
Magnetic resonance imaging and tractography with R
jonclayden's Repositories
jonclayden/shades
Simple colour manipulation in R
jonclayden/ore
An R interface to the Onigmo regular expression library
jonclayden/RNifti
Fast R and C++ access to NIfTI images
jonclayden/RNiftyReg
An R interface to the NiftyReg medical image registration library
jonclayden/mmand
Mathematical Morphology in Any Number of Dimensions
jonclayden/divest
Get images out of DICOM format quickly
jonclayden/imbibe
A Pipe-Friendly Image Calculator
jonclayden/R-Nova
R Interoperability for Nova
jonclayden/soma
An R implementation of the Self-Organising Migrating Algorithm
jonclayden/arrg
Flexible argument parsing for R scripts
jonclayden/reportr
A general message and error reporting system for R
jonclayden/RcppArray
Simple compatibility layer between Rcpp and std::array / std::span
jonclayden/loder
Dependency-Free Access to PNG Image Files
jonclayden/mritc
MRI Tissue Classification
jonclayden/r-manuals
Source code of R manuals mirror site
jonclayden/dcm2niix
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
jonclayden/docker-images
Dockerfiles for some useful containers
jonclayden/homebrew-core
🍻 Default formulae for the missing package manager for macOS (or Linux)
jonclayden/languageserver
An implementation of the Language Server Protocol for R
jonclayden/littler
A scripting and command-line front-end for GNU R
jonclayden/nifti_clib
C libraries for NIFTI support
jonclayden/niftyreg
This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utilities
jonclayden/niimath
niimath - a clone of fslmaths
jonclayden/Nova-CPP
C++ syntax highlighting for Nova
jonclayden/paed_mri_preprocessing
A group of scripts written specifically for use with data collected for a project entitled 'Early childhood bilingualism: Effects on brain structure and function'. The project is funded by The Leverhulme Trust.
jonclayden/Rxnat
retrieve neuro images from various public/private datasets
jonclayden/S7issue333
jonclayden/smt
Microscopic diffusion anisotropy imaging made easy!
jonclayden/textmate-bundles
Custom bundles and modifications for TextMate
jonclayden/tree-sitter-r