jonesor/Rcompadre

Issues

• popbio should be popdemo

  #142 opened 10 months ago by bramdhondt
  1

• cdb_rbind improvement

  #141 opened a year ago by jonesor
  0

• suggestion for additional calculations across matrices: mat_sd and mat_median

  #136 opened 2 years ago by darrennorris
  2

• 2 small taxonomic inconsistencies for crocodiles and turtles?

  #137 opened 2 years ago by darrennorris
  1

• add methods for CompadreDB objects or supress helper text

  #133 opened 2 years ago by wpetry
  2

• Add function example to vignettes

  #85 opened 4 years ago by jonesor
  0

• Add functionality to obtain particular historic database versions via version number.

  #88 opened 4 years ago by jonesor
  0

• Add a function to output a Matlab compatible data file

  #92 opened 4 years ago by jonesor
  0

• Add method for droplevels

  #99 opened 4 years ago by jonesor
  0

• Improve vignette to illustrate cdb_build_cdb functionality

  #123 opened 3 years ago by jonesor
  0

• Add vignette with NO piping

  #126 opened 3 years ago by jonesor
  1

• Standardize case convention on database column names

  #129 opened 3 years ago by wpetry
  1

• Add unit tests to cdb_build_cdb

  #127 opened 3 years ago by jonesor
  0

• Add argument to cdb_fetch to automatically add error flag columns

  #125 opened 3 years ago by jonesor
  1

• Add function to create CompadreDB object from matrices and metadata.

  #114 opened 3 years ago by jonesor
  2

• Function to create a valid CompadreDB/CompadreMat object from user-supplied matrices

  #78 opened 3 years ago by jonesor
  1

• Write vignette to illustrate `cdb_build_cdb` functionality

  #119 opened 3 years ago by jonesor
  1

• mat_to_string fails when whole matrix is NA

  #121 opened 3 years ago by jonesor
  1

• filter error when compiling vignette. Error in storage.mode(x) <- "double" :

  #122 opened 3 years ago by jonesor
  0

• cdb_rbind - allow binding of COMPADRE objects with different metadata.

  #120 opened 3 years ago by jonesor
  0

• Check that Rcompadre works well with the old database versions

  #98 opened 4 years ago by jonesor
  1

• Function to load local com(p)adre .Rdata files

  #93 opened 4 years ago by wpetry
  3

• Add check for survival probability >1 to cdb_check

  #74 opened 4 years ago by jonesor
  1

• Check and if necessary add contributor names to DESCRIPTION

  #70 opened 4 years ago by jonesor
  1

• Add into vignette example to get 1 matrix per study/species at random

  #67 opened 4 years ago by jonesor
  1

• Change name of matrixClass to MatrixClass for consistency

  #94 opened 4 years ago by jonesor
  4

• Add brief overview of tibbles to documentation

  #51 opened 4 years ago by patrickbarks
  1

• Update download message text

  #89 opened 4 years ago by jonesor
  1

• Rename master branch

  #84 opened 4 years ago by iainmstott
  2

• Add news.md file

  #81 opened 4 years ago by jonesor
  1

• Add github action to automatically build site

  #69 opened 4 years ago by jonesor
  1

• Matrix accessor functions should add rownames with stage names to the matrices

  #66 opened 4 years ago by jonesor
  1

• Grouping functions by type (@family tag)

  #73 opened 4 years ago by jonesor
  1

• new function to extract metadata

  #60 opened 4 years ago by GesaRoemer
  1

• Cryptic warning msg if db doesn't have SpeciesAccepted column

  #56 opened 5 years ago by patrickbarks
  0

• Add dplyr::summarize method?

  #57 opened 5 years ago by patrickbarks
  0

• as_cdb bug?

  #59 opened 5 years ago by jonesor
  2

• Online documentation

  #50 opened 5 years ago by patrickbarks
  8

• matrix accessor functions return lists for all CompadreDB objects

  #58 opened 5 years ago by iainmstott
  2

• Help users avoid pseudoreplication

  #49 opened 6 years ago by patrickbarks
  1

• Create branch to preserve current (non-dev) version?

  #46 opened 6 years ago by jonesor
  5

• Vignette on vectorizing with Rcompadre

  #53 opened 6 years ago by patrickbarks
  2

• rename "data" generic?

  #37 opened 6 years ago by levisc8
  3

• Function re-naming proposals

  #45 opened 6 years ago by patrickbarks
  2

• Error produced by mergeDBs() (dev branch)

  #36 opened 6 years ago by jonesor
  1

• Alternative to 47 accessor functions for the metadata columns

  #40 opened 6 years ago by patrickbarks
  4

• Make db@data printable

  #39 opened 6 years ago by patrickbarks
  3

• Cut species/study/matrix counts from db@version

  #42 opened 6 years ago by patrickbarks
  4

• Rename classes

  #38 opened 6 years ago by iainmstott
  5

• Speed up validCompadreM() checks

  #41 opened 6 years ago by patrickbarks
  1